:rocket: Excited to share our latest preprint: *"CodonTransformer: a multispecies...

:rocket: Excited to share our latest preprint: *"CodonTransformer: a multispecies codon optimizer using context-aware neural networks"*! CodonTransformer is a groundbreaking deep learning model that optimizes DNA sequences for heterologous protein expression across 164 species. By leveraging Transformer architecture and a novel training stratey named STREAM, it generates host-specific DNA sequences with natural-like codon patterns, minimizing negative regulatory elements. :globe_with_meridians: *Website* https://adibvafa.github.io/CodonTransformer/ :computer: *GitHub* (Please give us a :star:!) https://github.com/Adibvafa/CodonTransformer :hammer_and_wrench: *Colab Notebook* (Try it out!) https://adibvafa.github.io/CodonTransformer/GoogleColab :robot_face: *Model* https://huggingface.co/adibvafa/CodonTransformer :page_facing_up: *Paper* https://www.biorxiv.org/content/10.1101/2024.09.13.612903 Please share with anyone interested!